Keck Science 3 Colleges * 3 Disciplines * 1 Department

Selected Publications in Biology

Current Number of publications listed in Biology: 585


1. de Jong TR, Harris BN , Perea-Rodriguez JP, Saltzman W. in press. Physiological and neuroendocrine responses to chronic variable stress in male California mice (Peromyscus californicus):influence of social environment and paternal state. Psychoneuroendocrinology : . Abstract
 
2. Chen A, Singh C, Oikonomou G, Prober DA. 2017. Genetic Analysis of Histamine Signaling in Larval Zebrafish Sleep. eNeuro 4(1): pii: ENEURO.0286-16.2017. Abstract Article
 
3. AC Case**, FR Finseth**, CM Barr, L Fishman. 2016. Selfish evolution of cytonuclear incompatibility in Mimulus. Proceedings of the Royal Society B : . Article
 
4. Chen A*, Chiu CN*, Mosser EA, Kahn S†, Spence R, Prober DA. 2016. QRFP and Its Receptors Regulate Locomotor Activity and Sleep in Zebrafish. J Neurosci 36(6): 1823-1840. Abstract Article
 
5. D. Hajdu, J. Milton and T. Insperger. 2016. Extension of stability radius to neuromechanical systems with structured real perturbations. IEEE Trans. Neural Sys. Rehab. Eng. : . Abstract Article
 
6. Freyberg Z, Sonders MS, Aguilar JI, Hiranita T, Karam CS, Flores J, Pizzo AB, Zhang Y, Farino ZJ, Chen A, Martin CA, Kopajtic TA, Fei H, Hu G, Lin Y-Y, Mosharov EV, McCabe BD, Freyberg R, Wimalasena K, Hsin L-W, Sames D, Krantz DE, Katz JL, Sulzer D, Javitch JA. 2016. Mechanisms of amphetamine action illuminated through optical monitoring of dopamine synaptic vesicles in Drosophila brain. Nature Communications 7: 10652. Abstract Article
 
7. J. Milton, R. Meyer, M. Zhvanetsky, S. Ridge and T. Insperger. 2016. Control at stability's edge minimizes energetic costs: expert stick balancing. Journal of the Royal Society Interface 13: 20160212. Abstract Article
 
8. M Hendrick**, FR Finseth**, M Matthiassen*, K Palmer*, E Broder*, L Fishman. 2016. Top-down and bottom-up approaches combine to identify a major gene underlying monkeyflower adaptation to an extreme habita. Molecular Ecology : . Article
 
9. Martin CA, Myers KM, Chen A, Martin NT, Barajas A†, Schweizer FE, Krantz DE. 2016. Ziram, a pesticide associated with increased risk for Parkinson’s disease, differentially affects the presynaptic function of aminergic and glutamatergic nerve terminals at the Drosophila neuromuscular junction. Exp Neurol 275, Part 1: 232-241. Abstract Article
 
10. Wiley, E.A. and Chalker, D. 2016. A community model for course-based student research that advances faculty scholarship. CUR Quarterly 37(2): . Article
 
11. Yale, K., Neuman, M., Bulley, E., Tackett, A., Chait, B.T., Wiley, E.A. 2016. Phosphorylation-dependent targeting of Tetrahymena HP1 to condensed chromatin. mSphere 4 4: . Article
 
12. Zhaohua Tang and Gretchen Edwalds-Gilbert. 2016. Nucleic Acid and Protein Sample Preparation from Yeasts (Chapter 20). Peer-reviewed Book, Sample Preparation Techniques for Soil, Plant, and Animal Samples, Springer Protocols Handbooks DOI 10.1007/978-1-4939-3185-9_20 © Springer: .
 
13. FR Finseth, Y Dong, AS Saunders, L Fishman. 2015. Duplication and adaptive evolution of a key kinetochore protein in Mimulus, a genus with female meiotic drive. Molecular Biology and Evolution 32: 2694-2706. Article
 
14. Gretchen Edwalds-Gilbert. 2015. Location is Everything: an Educational Primer for Use with “Genetic analysis of the ribosome biogenesis factor Ltv1 of S. cerevisiae.”. Genetics 199: .
 
15. J. A. Nessler, T. Spargo, A Craig-Jones and J. Milton. 2015. Phase resetting behavior is influenced by treadmill walking speed. Gait & Posture 43: 187-191. Abstract
 
16. J. G. Milton. 2015. Time delays and the control of biological systems: An overview. 12th IFAC Workshop on time delay systems : 87-92. Abstract Article
 
17. J. Milton, G. Stepan and T. Insperger. 2015. Sensory dead zones and time delays in neural feedback control. 17th Yale Workshop on Adpative and Learning Systems : . Abstract Article
 
18. J. Milton, T. Insperger and G. Stepan. 2015. Human balance control: Dead zones, intermittency and micro-chaos. Mathematical approaches to biological systems: Networks, oscillations and collective phenomena : 1-28. Abstract Article
 
19. T. Insperger, J. Milton and G. Stepan. 2015. Semidiscretization for time-delayed neural balance control. SIAM J. Appl. Dyn. Sys. 14: 1258-1277. Abstract Article
 
20. T. Insperger, J. Milton and G. Stepan. 2015. Semi-discretization and the time-delayed PDA feedback control of human balance. 12th IFAC Workshop on time delay systems : 93-98. Abstract Article
 
21. Zhaohua Tang. 2015. Model Organisms for Studying the Cell Cycle (Chapter 2) . Peer-reviewed Book, Cell Cycle Oscillators: Methods and Protocols, Methods in Molecular Biology 1342: 21-57.
 
22. *Shi, J.J., L.M. Chan, A. Peel, *R. Lai, A.D. Yoder, and S.M. Goodman. 2014. A deep divergence time between sister species of Eidolon (Pteropodidae) with evidence for widespread panmixia. Acta Chiropterologica In press: .
 
23. FR Finseth, ER Bondra*, RG Harrison . 2014. Selective constraint dominates the evolution of a novel reproductive gland. Molecular Biology and Evolution 12: 3266-3281. Article
 
24. FR Finseth, RG Harrison . 2014. A comparison of next-generation sequencing technologies for transcriptome assembly and utility for RNA-Seq in a non-model bird. PLoS ONE 9: e108550. Article
 
25. Glasser NG, Kern SE, Newman DK. 2014. Phenazine redox cycling enhances anaerobic survival in Pseudomonas aeruginosa by facilitating generation of ATP and a proton-motive force. Molecular Microbiology 92: 399-412. Abstract
 
26. Grygoruk A, Chen A, Martin CA, Lawal HO, Fe H, Gutierrez G†, Biedermann T†, Najibi R†, Hadi R†, Chouhan AK, Murphy NP, Schweizer FE, Macleod GT, Maidment NT, Krantz DE. 2014. The Redistribution of Drosophila Vesicular Monoamine Transporter Mutants from Synaptic Vesicles to Large Dense-Core Vesicles Impairs Amine-Dependent Behaviors. J Neurosci 34(20): 6924-6937. Abstract Article
 
27. J. Milton and T. Ohira. 2014. Mathematics as a laboratory tool: Dynamics, delays and noise. : . Abstract Article
 
28. Jenkins, R.K.B., et al. 2014. Extinction risks and the conservation of Madagascar’s reptiles. PLoS ONE 9: e100173. Article
 
29. Kern SE, Newman DK. 2014. Measurement of Phenazines in Bacterial Cultures. Methods in Molecular Biology 1149: 303-310. Abstract Article
 
30. Kern SE, Price-Whelan AM, Newman DK. 2014. Extraction and measurement of NAD(P)(+) and NAD(P)H. Methods in Molecular Biology 1149: 311-323. Abstract Article
 
31. T. Insperger and J. Milton. 2014. Sensory uncertainty and stick balancing at the fingertip. Biological Cybernetics 108: 85-101. Abstract Article
 
32. Wiley, E.A. and Stover, N. 2014. Immediate dissemination of student discoveries to a model organism database enhances classroom-based research experiences. CBE Life Sci. Educ 13(1): 131-8.
 
33. Yoder, AD, LM Chan, M dos Reis, PA Larsen, CR Campbell, R Rasolarison, M. Barrett, C. Roos, P Kappeler, JP Bielawski, and Z Yang. 2014. Molecular evolutionary characterization of a V1R subfamily unique to strepsirrhine primates. Genome Biology and Evolution 6: 213-227. Article
 
34. *Shi, JJ, LM Chan, **Z Rakotomalala, **AM Heilman, SM Goodman, and AD Yoder. 2013. Latitude drives diversification in Madagascar's endemic dry forest rodent Eliurus myoxinus (subfamily Nesomyinae). Biological Journal of the Linnean Society 110: 500-517.
 
35. Harris BN , Saltzman W. 2013. Effect of reproductive status on HPA activity and reactivity in male California mice (Peromyscus californicus). Physiology and Behavior 112-113: 70-76. Abstract Article
 
36. Harris BN, Saltzman W. 2013. Effects of aging on hypothalamic-pituitary-adrenal (HPA) axis activity and reactivity in virgin male and female California mice (Peromyscus californicus). General and Comparative Endocrinology 186: 41-49. Abstract Article
 
37. Bugga L, McDaniel IE, Engie L, Armstrong JA. 2013. The Drosophila melanogaster CHD1 chromatin remodeling factor modulates global chromosome structure and counteracts HP1a and H3K9me2. PLoS One 8: e59496. Abstract Article
 
38. Chan, LM, JW Archie, AD Yoder, and LA Fitzgerald. 2013. Review of the systematic status of Sceloporus arenicolus Degenhardt and Jones 1972 with an estimate of divergence time. Zootaxa 3664: 312-320.
 
39. Chen A, Ng F, Lebestky T, Grygoruk A, Djapri C, Lawal HO, Zaveri HA†, Mehanzel F†, Najibi R†, Seidman G†, Murphy NP, Kelly RL, Ackerson LC, Maidment NT, Jackson FR, Krantz DE. 2013. Dispensable, redundant, complementary and cooperative roles for dopamine, octopamine and serotonin in Drosophila melanogaster. Genetics 193(1): 159-76. Abstract Article
 
40. FR Finseth, SR Iacovelli*, RG Harrison, EK Adkins-Regan . 2013. A non-semen copulatory fluid influences the outcome of sperm competition in Japanese quail. Journal of Evolutionary Biology 26: 1875-1889. Article
 
41. J G Milton, A. Fuerte, C. Belair, J. Lippai, A. Kamimura and T. Ohira. 2013. Delayed pursuit-escape as a model for virtual stick balancing . Nonlinear Theory and Its Applications, IEICE 4: 129-137. Abstract Article
 
42. P. J. Marin, A. J. Herrero, J. Milton, T. J. Hazell and D. Garcia-Lopez. 2013. Whole-body vibration applied during upper body exercise improves performance. Journal of Strength and Conditioning Research 27: 1807-1812. Abstract Article
 
43. T. Insperger, J. Milton and G. Stepan. 2013. Acceleration feedback improves balancing against reflex delay. J. Roy. Soc. Interface 10: 20120763. Abstract Article
 
44. Harris BN, Saltzman W, de Jong TR, Milnes MR. 2012. HPA function in the California Mouse (Peromyscus californicus): Changes in baseline activity, reactivity, and fecal excretion of corticosterone across the diurnal cycle. General and Comparative Endocrinology 179: 436-450. Abstract Article
 
45. Chan, LM, *D Choi, AP Raselimanana, HA Rakotondravony, and AD Yoder. 2012. Defining spatial and temporal patterns of phylogeographic structure in Madagascar's iguanid lizards (genus Oplurus). Molecular Ecology 21: 3839-3851.
 
46. de Jong TR, Korosi A, Harris BN , Perea-Rodriguez JP, Saltzman W. 2012. Individual variation in paternal responses of virgin California mice (Peromyscus californicus): behavioral and physiological correlates. Physiological and Biochemical Zoology 85: 740-751. Abstract Article
 
47. Dlugosz EM, Harris BN, Saltzman W, Chappell MA. 2012. Glucocorticoids, aerobic physiology, and locomotor behavior in California Mice. Physiological and Biochemical Zoology 85: 671-683. Abstract Article
 
48. H Gerstein, K O’Riordan, S Osting, M Schwarz & C Burger. 2012. Rescue of synaptic plasticity and spatial learning deficits in the hippocampus of Homer1 knockout mice by recombinant Adeno-associated viral gene delivery of Homer1c. Neurobiology of Learning & Memory 97: 17-29. Abstract Article
 
49. H Gerstein, R Hullinger, MJ Lindstrom & C Burger. 2012. A Behavioral Paradigm to Evaluate Hippocampal Performance in Aged Rodents for Pharmacological and Genetic Target Validation. PLoS One (in press) : .
 
50. J Milton. 2012. Neuronal avalanches, epileptic quakes and other transient forms of neurodynamics. European Journal of Neuroscience 36: 2156-2163. Abstract Article
 

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