Keck Science 3 Colleges * 3 Disciplines * 1 Department

Selected Publications in Biology

Current Number of publications listed in Biology: 572


1. de Jong TR, Harris BN , Perea-Rodriguez JP, Saltzman W. in press. Physiological and neuroendocrine responses to chronic variable stress in male California mice (Peromyscus californicus):influence of social environment and paternal state. Psychoneuroendocrinology : . Abstract
 
2. Chen A*, Chiu CN*, Mosser EA, Kahn S†, Spence R, Prober DA. 2016. QRFP and Its Receptors Regulate Locomotor Activity and Sleep in Zebrafish. J Neurosci 36(6): 1823-1840. Abstract Article
 
3. D. Hajdu, J. Milton and T. Insperger. 2016. Extension of stability radius to neuromechanical systems with structured real perturbations. IEEE Trans. Neural Sys. Rehab. Eng. : . Abstract Article
 
4. Freyberg Z, Sonders MS, Aguilar JI, Hiranita T, Karam CS, Flores J, Pizzo AB, Zhang Y, Farino ZJ, Chen A, Martin CA, Kopajtic TA, Fei H, Hu G, Lin Y-Y, Mosharov EV, McCabe BD, Freyberg R, Wimalasena K, Hsin L-W, Sames D, Krantz DE, Katz JL, Sulzer D, Javitch JA. 2016. Mechanisms of amphetamine action illuminated through optical monitoring of dopamine synaptic vesicles in Drosophila brain. Nature Communications 7: 10652. Abstract Article
 
5. Zhaohua Tang and Gretchen Edwalds-Gilbert. 2016. Nucleic Acid and Protein Sample Preparation from Yeasts (Chapter 20). Peer-reviewed Book, Sample Preparation Techniques for Soil, Plant, and Animal Samples, Springer Protocols Handbooks DOI 10.1007/978-1-4939-3185-9_20 © Springer: .
 
6. Gretchen Edwalds-Gilbert. 2015. Location is Everything: an Educational Primer for Use with “Genetic analysis of the ribosome biogenesis factor Ltv1 of S. cerevisiae.”. Genetics 199: .
 
7. J. A. Nessler, T. Spargo, A Craig-Jones and J. Milton. 2015. Phase resetting behavior is influenced by treadmill walking speed. Gait & Posture 43: 187-191. Abstract
 
8. J. G. Milton. 2015. Time delays and the control of biological systems: An overview. 12th IFAC Workshop on time delay systems : 87-92. Abstract Article
 
9. J. Milton, G. Stepan and T. Insperger. 2015. Sensory dead zones and time delays in neural feedback control. 17th Yale Workshop on Adpative and Learning Systems : . Abstract Article
 
10. J. Milton, T. Insperger and G. Stepan. 2015. Human balance control: Dead zones, intermittency and micro-chaos. Mathematical approaches to biological systems: Networks, oscillations and collective phenomena : 1-28. Abstract Article
 
11. T. Insperger, J. Milton and G. Stepan. 2015. Semidiscretization for time-delayed neural balance control. SIAM J. Appl. Dyn. Sys. 14: 1258-1277. Abstract Article
 
12. T. Insperger, J. Milton and G. Stepan. 2015. Semi-discretization and the time-delayed PDA feedback control of human balance. 12th IFAC Workshop on time delay systems : 93-98. Abstract Article
 
13. Zhaohua Tang. 2015. Model Organisms for Studying the Cell Cycle (Chapter 2) . Peer-reviewed Book, Cell Cycle Oscillators: Methods and Protocols, Methods in Molecular Biology 1342: 21-57.
 
14. *Shi, J.J., L.M. Chan, A. Peel, *R. Lai, A.D. Yoder, and S.M. Goodman. 2014. A deep divergence time between sister species of Eidolon (Pteropodidae) with evidence for widespread panmixia. Acta Chiropterologica In press: .
 
15. Glasser NG, Kern SE, Newman DK. 2014. Phenazine redox cycling enhances anaerobic survival in Pseudomonas aeruginosa by facilitating generation of ATP and a proton-motive force. Molecular Microbiology 92: 399-412. Abstract
 
16. Grygoruk A, Chen A, Martin CA, Lawal HO, Fe H, Gutierrez G†, Biedermann T†, Najibi R†, Hadi R†, Chouhan AK, Murphy NP, Schweizer FE, Macleod GT, Maidment NT, Krantz DE. 2014. The Redistribution of Drosophila Vesicular Monoamine Transporter Mutants from Synaptic Vesicles to Large Dense-Core Vesicles Impairs Amine-Dependent Behaviors. J Neurosci 34(20): 6924-6937. Abstract Article
 
17. J. Milton and T. Ohira. 2014. Mathematics as a laboratory tool: Dynamics, delays and noise. : . Abstract Article
 
18. Jenkins, R.K.B., et al. 2014. Extinction risks and the conservation of Madagascar’s reptiles. PLoS ONE 9: e100173. Article
 
19. Kern SE, Newman DK. 2014. Measurement of Phenazines in Bacterial Cultures. Methods in Molecular Biology 1149: 303-310. Abstract Article
 
20. Kern SE, Price-Whelan AM, Newman DK. 2014. Extraction and measurement of NAD(P)(+) and NAD(P)H. Methods in Molecular Biology 1149: 311-323. Abstract Article
 
21. T. Insperger and J. Milton. 2014. Sensory uncertainty and stick balancing at the fingertip. Biological Cybernetics 108: 85-101. Abstract Article
 
22. Yoder, AD, LM Chan, M dos Reis, PA Larsen, CR Campbell, R Rasolarison, M. Barrett, C. Roos, P Kappeler, JP Bielawski, and Z Yang. 2014. Molecular evolutionary characterization of a V1R subfamily unique to strepsirrhine primates. Genome Biology and Evolution 6: 213-227. Article
 
23. *Shi, JJ, LM Chan, **Z Rakotomalala, **AM Heilman, SM Goodman, and AD Yoder. 2013. Latitude drives diversification in Madagascar's endemic dry forest rodent Eliurus myoxinus (subfamily Nesomyinae). Biological Journal of the Linnean Society 110: 500-517.
 
24. Harris BN , Saltzman W. 2013. Effect of reproductive status on HPA activity and reactivity in male California mice (Peromyscus californicus). Physiology and Behavior 112-113: 70-76. Abstract Article
 
25. Harris BN, Saltzman W. 2013. Effects of aging on hypothalamic-pituitary-adrenal (HPA) axis activity and reactivity in virgin male and female California mice (Peromyscus californicus). General and Comparative Endocrinology 186: 41-49. Abstract Article
 
26. Bugga L, McDaniel IE, Engie L, Armstrong JA. 2013. The Drosophila melanogaster CHD1 chromatin remodeling factor modulates global chromosome structure and counteracts HP1a and H3K9me2. PLoS One 8: e59496. Abstract Article
 
27. Chan, LM, JW Archie, AD Yoder, and LA Fitzgerald. 2013. Review of the systematic status of Sceloporus arenicolus Degenhardt and Jones 1972 with an estimate of divergence time. Zootaxa 3664: 312-320.
 
28. Chen A, Ng F, Lebestky T, Grygoruk A, Djapri C, Lawal HO, Zaveri HA†, Mehanzel F†, Najibi R†, Seidman G†, Murphy NP, Kelly RL, Ackerson LC, Maidment NT, Jackson FR, Krantz DE. 2013. Dispensable, redundant, complementary and cooperative roles for dopamine, octopamine and serotonin in Drosophila melanogaster. Genetics 193(1): 159-76. Abstract Article
 
29. J G Milton, A. Fuerte, C. Belair, J. Lippai, A. Kamimura and T. Ohira. 2013. Delayed pursuit-escape as a model for virtual stick balancing . Nonlinear Theory and Its Applications, IEICE 4: 129-137. Abstract Article
 
30. P. J. Marin, A. J. Herrero, J. Milton, T. J. Hazell and D. Garcia-Lopez. 2013. Whole-body vibration applied during upper body exercise improves performance. Journal of Strength and Conditioning Research 27: 1807-1812. Abstract Article
 
31. T. Insperger, J. Milton and G. Stepan. 2013. Acceleration feedback improves balancing against reflex delay. J. Roy. Soc. Interface 10: 20120763. Abstract Article
 
32. Harris BN, Saltzman W, de Jong TR, Milnes MR. 2012. HPA function in the California Mouse (Peromyscus californicus): Changes in baseline activity, reactivity, and fecal excretion of corticosterone across the diurnal cycle. General and Comparative Endocrinology 179: 436-450. Abstract Article
 
33. Chan, LM, *D Choi, AP Raselimanana, HA Rakotondravony, and AD Yoder. 2012. Defining spatial and temporal patterns of phylogeographic structure in Madagascar's iguanid lizards (genus Oplurus). Molecular Ecology 21: 3839-3851.
 
34. de Jong TR, Korosi A, Harris BN , Perea-Rodriguez JP, Saltzman W. 2012. Individual variation in paternal responses of virgin California mice (Peromyscus californicus): behavioral and physiological correlates. Physiological and Biochemical Zoology 85: 740-751. Abstract Article
 
35. Dlugosz EM, Harris BN, Saltzman W, Chappell MA. 2012. Glucocorticoids, aerobic physiology, and locomotor behavior in California Mice. Physiological and Biochemical Zoology 85: 671-683. Abstract Article
 
36. H Gerstein, K O’Riordan, S Osting, M Schwarz & C Burger. 2012. Rescue of synaptic plasticity and spatial learning deficits in the hippocampus of Homer1 knockout mice by recombinant Adeno-associated viral gene delivery of Homer1c. Neurobiology of Learning & Memory 97: 17-29. Abstract Article
 
37. H Gerstein, R Hullinger, MJ Lindstrom & C Burger. 2012. A Behavioral Paradigm to Evaluate Hippocampal Performance in Aged Rodents for Pharmacological and Genetic Target Validation. PLoS One (in press) : .
 
38. J Milton. 2012. Neuronal avalanches, epileptic quakes and other transient forms of neurodynamics. European Journal of Neuroscience 36: 2156-2163. Abstract Article
 
39. J. G. Milton. 2012. Intermittent motor control: The "drift-and-act" hypothesis. Progress in Motor Control: Neural, computational and dynamic approaches : 169-193. Abstract Article
 
40. J. L. Cabrera and J. G. Milton. 2012. Stick balancing, falls and Dragon Kings. European Physics Journal Special Topics 205: 231-241. Abstract Article
 
41. Johnson, LA, LM Chan, K Burr, and D Hendrickson. 2012. Navarretia furnissii (Polemoniaceae), a new diploid species from the intermountain western United States distinguished from tetraploid Navarretia saximontana. Phytotaxa 42: 51-61.
 
42. Johnson, LA, LM Chan, R Pozner, and LD Glazier. 2012. Allotetraploids in Patagonia with affinities to western North American diploids: did dispersal or genome doubling occur first?. Botanical Review 78: 288-306.
 
43. Marta Radman-Livaja, Tiffani K. Quan, Lourdes Valenzuela, Jennifer A. Armstrong, Tibor van Welsem, TaeSoo Kim, Laura J. Lee, Stephen Buratowski, Fred van Leeuwen, Oliver J. Rando, Grant A. Hartzog. 2012. A Key Role for Chd1 in Histone H3 Dynamics at the 3′ Ends of Long Genes in Yeast. PLoS Genetics : 10.1371/journal.pgen.1002811. Abstract Article
 
44. Weisrock, DW, SD Smith, LM Chan, K Biebouw, PM Kappeler, and AD Yoder. 2012. Concatenation and concordance in the reconstruction of Mouse Lemur phylogeny: an empirical demonstration of the effect of allele sampling in phylogenetics. Molecular Biology and Evolution 29: 1615-1630.
 
45. Williams, S.M.*, A. Nast* and M.J. Coleman. 2012. Characterization of synaptically connected nuclei in a potential motor feedback pathway in the zebra finch song system. PLoS ONE 7(2): e32178. Abstract
 
46. Zhaohua Tang, Maria Luca, Laura Taggart-Murphy, Jessica Portillio, Cathey Chang, Ayse Guven, Ren-Jang Lin, Johanne Murray, and Antony Carr. 2012. Interacting Factors and Cellular Localization of SR Protein-specific Kinase Dsk1.. Experimental Cell Research 318 (16): 2071-2084. Abstract Article
 
47. Harris BN, Perea-Rodriguez JP, Saltzman W. 2011. Acute effects of corticosterone injection on paternal behavior in California mouse (Peromyscus californicus) fathers. Hormones and Behavior 60: 666-675. Abstract Article
 
48. A. Quan, I. Osorio, T. Ohira and J. Milton. 2011. Vulnerability to paroxysmal oscillations in delayed neural networks: A basis for nocturnal frontal lobe epilepsy?. Chaos 21: 047512. Abstract Article
 
49. Chan, LM, JL Brown, and AD Yoder. 2011. Integrating statistical genetic and geospatial methods brings new power to phylogeography. Molecular Phylogenetics and Evolution 59: 523-537.
 
50. Chan, LM, SM Goodman, **MD Nowak, DW Weisrock, and AD Yoder. 2011. Increased population sampling confirms low genetic divergence among Pteropus (Chiroptera: Pteropodidae) fruit bats of Madagascar and other western Indian Ocean islands. PLoS Currents: Tree of Life 3: RRN1226. Article
 

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