Keck Science 3 Colleges * 15 Majors * 1 Department

Selected Publications in Biology

Current Number of publications listed in Biology: 605


1. de Jong TR, Harris BN , Perea-Rodriguez JP, Saltzman W. in press. Physiological and neuroendocrine responses to chronic variable stress in male California mice (Peromyscus californicus):influence of social environment and paternal state. Psychoneuroendocrinology : . Abstract
 
2. Hall, LK, Larsen, RT, Knight, RN, McMillan, BR. 2018. Feral horses influence both spatial and temporal patterns of water use by native ungulates in a semi-arid environment. Ecosphere 9: e02096. Abstract
 
3. Nix, JN, RG Howell, LK Hall, and BR McMillan. 2018. The influence of periodic increases of human activity on crepuscular and nocturnal mammals: testing the weekend effect. Behavioural Processes 146: 16-21. Abstract
 
4. Chen A, Singh C, Oikonomou G, Prober DA. 2017. Genetic Analysis of Histamine Signaling in Larval Zebrafish Sleep. eNeuro 4(1): pii: ENEURO.0286-16.2017. Abstract Article
 
5. MACIVER, M.A.*, SCHMITZ, L.*, UGURCAN, M., MURPHY, T.D., & C. D. MOBLEY. 2017. Massive increase in visual range preceded the origin of terrestrial vertebrates. Proceedings of the National Academy of Sciences 114: E2375-2384.
 
6. Stanhope, E., L. Ziegler, T. Haque, L. Le, M. Vinces, G. K. Davis, A. Zieffler, P. Brodfuehrer, M. Preest, J. Belisky, C. Umbanhowar, Jr., P. J. Overvoorde. 2017. Development of a Biological Science Quantitative Reasoning Exam (BioSQuaRE). CBE Life Sciences 16, DOI:10.1187/cbe.16-10-0301 : .
 
7. AC Case**, FR Finseth**, CM Barr, L Fishman. 2016. Selfish evolution of cytonuclear incompatibility in Mimulus. Proceedings of the Royal Society B : . Article
 
8. Chen A*, Chiu CN*, Mosser EA, Kahn S†, Spence R, Prober DA. 2016. QRFP and Its Receptors Regulate Locomotor Activity and Sleep in Zebrafish. J Neurosci 36(6): 1823-1840. Abstract Article
 
9. D. Hajdu, J. Milton and T. Insperger. 2016. Extension of stability radius to neuromechanical systems with structured real perturbations. IEEE Trans. Neural Sys. Rehab. Eng. : . Abstract Article
 
10. Day, CC, MD Westover, LK Hall, RT Larsen, BR McMillan. 2016. Comparing direct and indirect methods to estimate detection rates and site use of a cryptic semi-aquatic carnivore. Ecological Indicators 230-234: . Abstract
 
11. Freyberg Z, Sonders MS, Aguilar JI, Hiranita T, Karam CS, Flores J, Pizzo AB, Zhang Y, Farino ZJ, Chen A, Martin CA, Kopajtic TA, Fei H, Hu G, Lin Y-Y, Mosharov EV, McCabe BD, Freyberg R, Wimalasena K, Hsin L-W, Sames D, Krantz DE, Katz JL, Sulzer D, Javitch JA. 2016. Mechanisms of amphetamine action illuminated through optical monitoring of dopamine synaptic vesicles in Drosophila brain. Nature Communications 7: 10652. Abstract Article
 
12. Hall, LK, CT Lambert, RT Larsen, RN Knight, and BR McMillan. 2016. Will climate change leave some desert bat species thirstier than others?. Biological Conservation 201: 284-292. Abstract
 
13. Hall, LK, MD Westover, CC Day, RT Larsen, RN Knight, and BR McMillan. 2016. Influence of exotic horses on the use of water by communities of native wildlife in a semi-arid environment. Journal of Arid Environments 127: 100-105. Abstract
 
14. J. Milton, R. Meyer, M. Zhvanetsky, S. Ridge and T. Insperger. 2016. Control at stability's edge minimizes energetic costs: expert stick balancing. Journal of the Royal Society Interface 13: 20160212. Abstract Article
 
15. Jay KA, Smith DL, Blackburn EH. 2016. Early Loss of Telomerase Action in Yeast Creates a Dependence on the DNA Damage Response Adaptor Proteins. Mol Cell Biol : . Abstract Article
 
16. M Hendrick**, FR Finseth**, M Matthiassen*, K Palmer*, E Broder*, L Fishman. 2016. Top-down and bottom-up approaches combine to identify a major gene underlying monkeyflower adaptation to an extreme habita. Molecular Ecology : . Article
 
17. Martin CA, Myers KM, Chen A, Martin NT, Barajas A†, Schweizer FE, Krantz DE. 2016. Ziram, a pesticide associated with increased risk for Parkinson’s disease, differentially affects the presynaptic function of aminergic and glutamatergic nerve terminals at the Drosophila neuromuscular junction. Exp Neurol 275, Part 1: 232-241. Abstract Article
 
18. Preest, M.R., M.J. Ward, T. Poon, and J.W. Hermanson. 2016. Chemical prey luring in Jackson’s chameleons. Physiological and Biochemical Zoology 89(2): 110-117.
 
19. Wiley, E.A. and Chalker, D. 2016. A community model for course-based student research that advances faculty scholarship. CUR Quarterly 37(2): . Article
 
20. Yale, K., Neuman, M., Bulley, E., Tackett, A., Chait, B.T., Wiley, E.A. 2016. Phosphorylation-dependent targeting of Tetrahymena HP1 to condensed chromatin. mSphere 4 4: . Article
 
21. Zhaohua Tang and Gretchen Edwalds-Gilbert. 2016. Nucleic Acid and Protein Sample Preparation from Yeasts (Chapter 20). Peer-reviewed Book, Sample Preparation Techniques for Soil, Plant, and Animal Samples, Springer Protocols Handbooks DOI 10.1007/978-1-4939-3185-9_20 © Springer: .
 
22. FR Finseth, Y Dong, AS Saunders, L Fishman. 2015. Duplication and adaptive evolution of a key kinetochore protein in Mimulus, a genus with female meiotic drive. Molecular Biology and Evolution 32: 2694-2706. Article
 
23. Gretchen Edwalds-Gilbert. 2015. Location is Everything: an Educational Primer for Use with “Genetic analysis of the ribosome biogenesis factor Ltv1 of S. cerevisiae.”. Genetics 199: .
 
24. J. A. Nessler, T. Spargo, A Craig-Jones and J. Milton. 2015. Phase resetting behavior is influenced by treadmill walking speed. Gait & Posture 43: 187-191. Abstract
 
25. J. G. Milton. 2015. Time delays and the control of biological systems: An overview. 12th IFAC Workshop on time delay systems : 87-92. Abstract Article
 
26. J. Milton, G. Stepan and T. Insperger. 2015. Sensory dead zones and time delays in neural feedback control. 17th Yale Workshop on Adpative and Learning Systems : . Abstract Article
 
27. J. Milton, T. Insperger and G. Stepan. 2015. Human balance control: Dead zones, intermittency and micro-chaos. Mathematical approaches to biological systems: Networks, oscillations and collective phenomena : 1-28. Abstract Article
 
28. T. Insperger, J. Milton and G. Stepan. 2015. Semidiscretization for time-delayed neural balance control. SIAM J. Appl. Dyn. Sys. 14: 1258-1277. Abstract Article
 
29. T. Insperger, J. Milton and G. Stepan. 2015. Semi-discretization and the time-delayed PDA feedback control of human balance. 12th IFAC Workshop on time delay systems : 93-98. Abstract Article
 
30. Xie Z, Jay KA, Smith DL, Zhang Y, Liu Z, Zheng J, Tian R, Li H, Blackburn EH. 2015. Early telomerase inactivation accelerates aging independently of telomere length. Cell : . Abstract Article
 
31. Zhaohua Tang. 2015. Model Organisms for Studying the Cell Cycle (Chapter 2) . Peer-reviewed Book, Cell Cycle Oscillators: Methods and Protocols, Methods in Molecular Biology 1342: 21-57.
 
32. *Shi, J.J., L.M. Chan, A. Peel, *R. Lai, A.D. Yoder, and S.M. Goodman. 2014. A deep divergence time between sister species of Eidolon (Pteropodidae) with evidence for widespread panmixia. Acta Chiropterologica In press: .
 
33. ANGIELCZYK, K. D. & L. SCHMITZ* . 2014. ). Nocturnality in synapsids predates the origin of mammals by over 100 million years. Proceedings of the Royal Society of London B 281: 20141642.
 
34. FR Finseth, ER Bondra*, RG Harrison . 2014. Selective constraint dominates the evolution of a novel reproductive gland. Molecular Biology and Evolution 12: 3266-3281. Article
 
35. FR Finseth, RG Harrison . 2014. A comparison of next-generation sequencing technologies for transcriptome assembly and utility for RNA-Seq in a non-model bird. PLoS ONE 9: e108550. Article
 
36. Glasser NG, Kern SE, Newman DK. 2014. Phenazine redox cycling enhances anaerobic survival in Pseudomonas aeruginosa by facilitating generation of ATP and a proton-motive force. Molecular Microbiology 92: 399-412. Abstract
 
37. Grygoruk A, Chen A, Martin CA, Lawal HO, Fe H, Gutierrez G†, Biedermann T†, Najibi R†, Hadi R†, Chouhan AK, Murphy NP, Schweizer FE, Macleod GT, Maidment NT, Krantz DE. 2014. The Redistribution of Drosophila Vesicular Monoamine Transporter Mutants from Synaptic Vesicles to Large Dense-Core Vesicles Impairs Amine-Dependent Behaviors. J Neurosci 34(20): 6924-6937. Abstract Article
 
38. J. Milton and T. Ohira. 2014. Mathematics as a laboratory tool: Dynamics, delays and noise. : . Abstract Article
 
39. Jenkins, R.K.B., et al. 2014. Extinction risks and the conservation of Madagascar’s reptiles. PLoS ONE 9: e100173. Article
 
40. Kern SE, Newman DK. 2014. Measurement of Phenazines in Bacterial Cultures. Methods in Molecular Biology 1149: 303-310. Abstract Article
 
41. Kern SE, Price-Whelan AM, Newman DK. 2014. Extraction and measurement of NAD(P)(+) and NAD(P)H. Methods in Molecular Biology 1149: 311-323. Abstract Article
 
42. T. Insperger and J. Milton. 2014. Sensory uncertainty and stick balancing at the fingertip. Biological Cybernetics 108: 85-101. Abstract Article
 
43. Wiley, E.A. and Stover, N. 2014. Immediate dissemination of student discoveries to a model organism database enhances classroom-based research experiences. CBE Life Sci. Educ 13(1): 131-8.
 
44. Yoder, AD, LM Chan, M dos Reis, PA Larsen, CR Campbell, R Rasolarison, M. Barrett, C. Roos, P Kappeler, JP Bielawski, and Z Yang. 2014. Molecular evolutionary characterization of a V1R subfamily unique to strepsirrhine primates. Genome Biology and Evolution 6: 213-227. Article
 
45. *Shi, JJ, LM Chan, **Z Rakotomalala, **AM Heilman, SM Goodman, and AD Yoder. 2013. Latitude drives diversification in Madagascar's endemic dry forest rodent Eliurus myoxinus (subfamily Nesomyinae). Biological Journal of the Linnean Society 110: 500-517.
 
46. Harris BN , Saltzman W. 2013. Effect of reproductive status on HPA activity and reactivity in male California mice (Peromyscus californicus). Physiology and Behavior 112-113: 70-76. Abstract Article
 
47. Harris BN, Saltzman W. 2013. Effects of aging on hypothalamic-pituitary-adrenal (HPA) axis activity and reactivity in virgin male and female California mice (Peromyscus californicus). General and Comparative Endocrinology 186: 41-49. Abstract Article
 
48. Bugga L, McDaniel IE, Engie L, Armstrong JA. 2013. The Drosophila melanogaster CHD1 chromatin remodeling factor modulates global chromosome structure and counteracts HP1a and H3K9me2. PLoS One 8: e59496. Abstract Article
 
49. Chan, LM, JW Archie, AD Yoder, and LA Fitzgerald. 2013. Review of the systematic status of Sceloporus arenicolus Degenhardt and Jones 1972 with an estimate of divergence time. Zootaxa 3664: 312-320.
 
50. Chen A, Ng F, Lebestky T, Grygoruk A, Djapri C, Lawal HO, Zaveri HA†, Mehanzel F†, Najibi R†, Seidman G†, Murphy NP, Kelly RL, Ackerson LC, Maidment NT, Jackson FR, Krantz DE. 2013. Dispensable, redundant, complementary and cooperative roles for dopamine, octopamine and serotonin in Drosophila melanogaster. Genetics 193(1): 159-76. Abstract Article
 

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